The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama03132 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama03134 | |
Ama03135 | CWF19, CELL CYCLE CONTROL PROTEIN |
Ama03136 | UNCHARACTERIZED |
Ama03137 | ATP SYNTHASE EPSILON CHAIN, MITOCHONDRIAL |
Ama03138 | BONUS, ISOFORM C-RELATED |
Ama03139 | |
Ama03140 | PARANEOPLASTIC ANTIGEN |
Ama03141 | BONUS, ISOFORM C-RELATED |
Ama03142 | BONUS, ISOFORM C-RELATED |
Ama03143 | PARANEOPLASTIC ANTIGEN |
Ama03144 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama03145 | |
Ama03146 | B-LYMPHOCYTE ANTIGEN-RELATED |
Ama03148 | |
Ama03150 | ARGINYL-TRNA SYNTHETASE |
Ama03153 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama03155 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama03162 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Ama03163 | |
Ama03164 | |
Ama03165 | |
Ama03166 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Ama03167 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
Ama03168 | HOMEOBOX PROTEIN CDX |
Ama03169 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama03170 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama03171 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama03172 | |
Ama03173 | PEPTIDASE |
Ama03174 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama03175 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama03177 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama03178 | INHIBITOR OF APOPTOSIS |
Ama03179 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
Ama03180 | INHIBITOR OF APOPTOSIS |
Ama03181 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03182 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama03183 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03184 | |
Ama03185 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03186 | |
Ama03188 | |
Ama03189 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama03191 | |
Ama03192 | FTP DOMAIN-CONTAINING PROTEIN |
Ama03194 | REVERSE TRANSCRIPTASES |
Ama03195 | |
Ama03196 | |
Ama03197 |