The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama01683 | |
Ama01685 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama01687 | |
Ama01690 | SYNAPTOTAGMIN |
Ama01691 | SYNAPTOTAGMIN |
Ama01692 | |
Ama01693 | |
Ama01694 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama01695 | |
Ama01697 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 2 |
Ama01698 | UBIQUITINATION FACTOR E4 |
Ama01699 | |
Ama01700 | |
Ama01701 | |
Ama01704 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
Ama01706 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama01707 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
Ama01708 | |
Ama01709 | |
Ama01710 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama01711 | ENDONUCLEASE III-LIKE PROTEIN 1 |
Ama01712 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
Ama01713 | |
Ama01714 | HOMEOBOX PROTEIN ARISTALESS |
Ama01716 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
Ama01718 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama01720 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
Ama01721 | |
Ama01722 | |
Ama01723 | INHIBITOR OF APOPTOSIS |
Ama01724 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama01725 | |
Ama01726 | UNCHARACTERIZED |
Ama01727 | MUCIN-22 |
Ama01728 | PEPTIDASE |
Ama01729 | |
Ama01732 | |
Ama01734 | BAX INHIBITOR-RELATED |
Ama01735 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama01736 | |
Ama01737 | RETROTRANSPOSON GAG-LIKE PROTEIN 9 |
Ama01738 | PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN |
Ama01739 | |
Ama01740 | |
Ama01741 | |
Ama01742 | |
Ama01743 | |
Ama01744 | PROTEIN NJMU-R1 |
Ama01745 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama01746 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |