The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama06052 | CYCLIN-DEPENDENT KINASE INHIBITOR 1 |
Ama06053 | INHIBITOR OF APOPTOSIS |
Ama06054 | SUA5 |
Ama06055 | PUTATIVE-RELATED |
Ama06056 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama06057 | RABIN3-RELATED |
Ama06058 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama06060 | CYTOKINE RECEPTOR |
Ama06061 | CYTOKINE RECEPTOR |
Ama06062 | |
Ama06063 | |
Ama06064 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06065 | |
Ama06067 | CYTOKINE RECEPTOR |
Ama06068 | CYTOKINE RECEPTOR |
Ama06069 | |
Ama06071 | |
Ama06072 | CYTOKINE RECEPTOR |
Ama06073 | CYTOKINE RECEPTOR |
Ama06074 | CYTOKINE RECEPTOR |
Ama06075 | CYTOKINE RECEPTOR |
Ama06076 | THAP DOMAIN PROTEIN |
Ama06077 | ATP-DEPENDENT DNA HELICASE |
Ama06078 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06079 | |
Ama06080 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06081 | |
Ama06082 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06083 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06084 | CYTOKINE RECEPTOR |
Ama06085 | CYTOKINE RECEPTOR |
Ama06087 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama06088 | CYTOKINE RECEPTOR |
Ama06089 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Ama06090 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
Ama06091 | |
Ama06092 | RNA HELICASE |
Ama06094 | RNA-BINDING PROTEIN RELATED |
Ama06096 | NUCLEAR PORE COMPLEX PROTEIN NUP205 |
Ama06098 | UNCHARACTERIZED |
Ama06099 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama06100 | SHIPPO-1-RELATED |
Ama06102 | |
Ama06104 | INHIBITOR OF APOPTOSIS |
Ama06105 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama06106 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama06108 | INHIBITOR OF APOPTOSIS |
Ama06109 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama06110 | REGUCALCIN |
Ama06111 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |