The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama05907 | ALDEHYDE DEHYDROGENASE-RELATED |
Ama05910 | |
Ama05911 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama05912 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Ama05914 | CYTOKINE RECEPTOR |
Ama05917 | |
Ama05919 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Ama05921 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
Ama05922 | KELCH PROTEIN |
Ama05923 | THAP DOMAIN PROTEIN |
Ama05925 | TRANSMEMBRANE PROTEIN |
Ama05926 | |
Ama05927 | |
Ama05930 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
Ama05931 | |
Ama05932 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
Ama05933 | 6-PHOSPHOGLUCONOLACTONASE |
Ama05934 | |
Ama05935 | TETRATRICOPEPTIDE REPEAT PROTEIN 38 |
Ama05936 | PEPTIDYL-TRNA HYDROLASE 2 |
Ama05937 | FMRFAMIDE RECEPTOR-RELATED |
Ama05941 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama05942 | |
Ama05943 | ISOBUTYRYL-COA DEHYDROGENASE |
Ama05944 | PROTEIN O-MANNOSYL-TRANSFERASE TMTC2 |
Ama05947 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
Ama05954 | |
Ama05955 | |
Ama05956 | ETS |
Ama05957 | 43 KDA RECEPTOR-ASSOCIATED PROTEIN OF THE SYNAPSE |
Ama05958 | SMALL MEMBRANE PROTEIN-RELATED |
Ama05959 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama05960 | |
Ama05961 | ZINC FINGER MYM-TYPE PROTEIN |
Ama05962 | UNCHARACTERIZED PROTEIN YBCL-RELATED |
Ama05963 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama05964 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
Ama05965 | BETA-AMYLOID BINDING PROTEIN-RELATED |
Ama05966 | |
Ama05967 | DIMETHYLANILINE MONOOXYGENASE |
Ama05968 | |
Ama05971 | - |
Ama05972 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Ama05973 | INHIBITOR OF APOPTOSIS |
Ama05974 | INHIBITOR OF APOPTOSIS |
Ama05976 | LP04239P |
Ama05978 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
Ama05979 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama05980 | INHIBITOR OF APOPTOSIS |
Ama05983 | INHIBITOR OF APOPTOSIS |