The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama06180 | MIDASIN-RELATED |
| Ama06181 | CELL DEATH ACTIVATOR CIDE |
| Ama06182 | ZINC FINGER PROTEIN |
| Ama06183 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3 |
| Ama06184 | PERIAXIN-LIKE |
| Ama06185 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Ama06186 | |
| Ama06187 | OSJNBA0013A04.12 PROTEIN |
| Ama06188 | AROMATIC AMINO ACID HYDROXYLASE |
| Ama06190 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Ama06192 | |
| Ama06193 | |
| Ama06194 | |
| Ama06195 | |
| Ama06196 | |
| Ama06197 | AROMATIC AMINO ACID HYDROXYLASE |
| Ama06198 | AROMATIC AMINO ACID HYDROXYLASE |
| Ama06199 | AROMATIC AMINO ACID HYDROXYLASE |
| Ama06200 | AROMATIC AMINO ACID HYDROXYLASE |
| Ama06201 | |
| Ama06202 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| Ama06203 | |
| Ama06204 | |
| Ama06205 | BONUS, ISOFORM C-RELATED |
| Ama06206 | |
| Ama06207 | BONUS, ISOFORM C-RELATED |
| Ama06208 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| Ama06209 | |
| Ama06210 | BONUS, ISOFORM C-RELATED |
| Ama06211 | BONUS, ISOFORM C-RELATED |
| Ama06213 | |
| Ama06214 | BONUS, ISOFORM C-RELATED |
| Ama06215 | |
| Ama06216 | |
| Ama06217 | |
| Ama06218 | BONUS, ISOFORM C-RELATED |
| Ama06219 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama06221 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
| Ama06222 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Ama06223 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Ama06224 | BONUS, ISOFORM C-RELATED |
| Ama06225 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Ama06226 | |
| Ama06227 | |
| Ama06228 | TRANSPOSON |
| Ama06229 | |
| Ama06230 | |
| Ama06231 | |
| Ama06232 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| Ama06233 | RIBOSOMAL PROTEIN L23-RELATED |
