The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama39696 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39697 | |
Ama39698 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama39700 | UNCHARACTERIZED |
Ama39702 | BLR2807 PROTEIN |
Ama39703 | PUTATIVE-RELATED |
Ama39704 | REVERSE TRANSCRIPTASES |
Ama39705 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama39707 | |
Ama39708 | |
Ama39710 | THAP DOMAIN PROTEIN |
Ama39712 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama39718 | PUTATIVE-RELATED |
Ama39719 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama39720 | FTP DOMAIN-CONTAINING PROTEIN |
Ama39721 | |
Ama39722 | |
Ama39723 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama39724 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama39725 | |
Ama39726 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Ama39727 | |
Ama39728 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama39730 | |
Ama39732 | CEREBELLIN-RELATED |
Ama39733 | |
Ama39735 | |
Ama39736 | |
Ama39737 | |
Ama39738 | CARBOHYDRATE SULFOTRANSFERASE |
Ama39740 | |
Ama39741 | |
Ama39742 | G PROTEIN-COUPLED RECEPTOR |
Ama39743 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39744 | UNNAMED PRODUCT |
Ama39745 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama39746 | DUAL OXIDASE 2 |
Ama39747 | RIKEN CDNA D130052B06 GENE |
Ama39749 | |
Ama39750 | INHIBITOR OF APOPTOSIS |
Ama39751 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama39753 | MONOCARBOXYLATE TRANSPORTER |
Ama39754 | |
Ama39755 | |
Ama39757 | |
Ama39760 | ATILLA, ISOFORM B-RELATED-RELATED |
Ama39766 | |
Ama39769 | LD33804P |
Ama39770 | NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG |
Ama39774 | LD33804P |