The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama39395 | SI:CH211-108C17.2-RELATED-RELATED |
Ama39396 | |
Ama39398 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11 |
Ama393_5db7b01a | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama39400 | SPERMATHECAL PHYSIOLOGY VARIANT |
Ama39405 | |
Ama39406 | |
Ama39407 | ALDOSE-1-EPIMERASE |
Ama39408 | |
Ama39409 | FTP DOMAIN-CONTAINING PROTEIN |
Ama39410 | |
Ama39411 | |
Ama39412 | MUCIN-17 |
Ama39413 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39414 | AMSH-LIKE PROTEASE |
Ama39417 | |
Ama39418 | |
Ama39421 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Ama39422 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama39423 | |
Ama39424 | |
Ama39425 | |
Ama39426 | |
Ama39427 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39431 | |
Ama39433 | |
Ama39434 | |
Ama39442 | |
Ama39444 | |
Ama39445 | 40S RIBOSOMAL PROTEIN S7 |
Ama39447 | ATP-DEPENDENT DNA HELICASE |
Ama39448 | |
Ama39453 | |
Ama39454 | |
Ama39455 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama39456 | |
Ama39457 | AMINOMETHYLTRANSFERASE |
Ama39458 | AMINOMETHYLTRANSFERASE |
Ama39460 | HEH2P |
Ama39461 | |
Ama39462 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
Ama39463 | |
Ama39464 | TETRATRICOPEPTIDE REPEAT PROTEIN 31 |
Ama39465 | |
Ama39467 | |
Ama39468 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39469 | STROMAL ANTIGEN |
Ama39475 | |
Ama39477 | |
Ama39480 |