The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama39481 | |
Ama39482 | |
Ama39483 | |
Ama39484 | |
Ama39485 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama39486 | ACETYLTRANSFERASE |
Ama39488 | TAZ PROTEIN TAFAZZIN |
Ama39491 | CELL DEATH ACTIVATOR CIDE |
Ama39492 | WD REPEAT-CONTAINING PROTEIN 11 |
Ama39493 | PROTEIN CBG10425 |
Ama39494 | PROTEIN CBG10425 |
Ama39495 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39496 | |
Ama39497 | |
Ama39499 | |
Ama394_5db7b01a | COILIN |
Ama39500 | FORKHEAD BOX PROTEIN BINIOU |
Ama39501 | |
Ama39503 | 40S RIBOSOMAL PROTEIN S7 |
Ama39505 | |
Ama39506 | |
Ama39509 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Ama39510 | ACETYL-COENZYME A SYNTHETASE |
Ama39511 | ACETYL-COENZYME A SYNTHETASE |
Ama39512 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39513 | IP13529P |
Ama39514 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama39516 | INHIBITOR OF APOPTOSIS |
Ama39521 | CALCIUM BINDING PROTEIN |
Ama39522 | |
Ama39523 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama39525 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama39526 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama39527 | TRNA METHYLTRANSFERASE |
Ama39528 | |
Ama39531 | |
Ama39535 | |
Ama39536 | BETA-GALACTOSIDASE RELATED |
Ama39537 | THAP DOMAIN PROTEIN |
Ama39538 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama39539 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama39541 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39542 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama39543 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama39544 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39545 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama39550 | |
Ama39551 | |
Ama39554 | |
Ama39555 |