About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama39034
Ama39036VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
Ama39040INHIBITOR OF APOPTOSIS
Ama39041RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama39042
Ama39043LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Ama39045
Ama39047TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED
Ama39048TRANSCRIPTION FACTOR CASTOR PROTEIN MING -RELATED
Ama39049GLYCOPROTEIN HORMONE RECEPTOR
Ama39050
Ama39051LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Ama39052IP13529P
Ama39053
Ama39054
Ama39055PROTEIN CBG26694
Ama39057ORGANIC ANION TRANSPORTER
Ama39058ORGANIC ANION TRANSPORTER
Ama39073SERINE/THREONINE PROTEIN PHOSPHATASE
Ama39077
Ama39078BONUS, ISOFORM C-RELATED
Ama39081
Ama39082SI:CH73-193C12.2-RELATED
Ama39083INHIBITOR OF APOPTOSIS
Ama39087
Ama39088UPF0565 PROTEIN C2ORF69
Ama39089PUTATIVE-RELATED
Ama39090MY011 PROTEIN
Ama39091ENDONUCLEASE RELATED
Ama39099GEO11419P1
Ama390_5db7b01aSODIUM/DICARBOXYLATE SYMPORTER-RELATED
Ama39100LD33804P
Ama39101
Ama39102SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Ama39103REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama39104PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama39106TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Ama39107ENDONUCLEASE-RELATED
Ama39108TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Ama39109ENDONUCLEASE-RELATED
Ama39110
Ama39113EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama39114E3 UBIQUITIN-PROTEIN LIGASE TRIP12
Ama39115E3 UBIQUITIN-PROTEIN LIGASE TRIP12
Ama39116
Ama39117PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Ama39118UNCHARACTERIZED
Ama39124
Ama39125
Ama39127
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