About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama38879
Ama38880
Ama38881PARVIN
Ama38886TRANSPOSABLE ELEMENT-RELATED
Ama38887
Ama38890
Ama38892SID1 TRANSMEMBRANE FAMILY MEMEBER
Ama38893SID1 TRANSMEMBRANE FAMILY MEMEBER
Ama38894SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN
Ama38895DYNEIN HEAVY CHAIN FAMILY PROTEIN
Ama38896GAMMA TUBULIN COMPLEX PROTEIN
Ama38898ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
Ama38899UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3
Ama38900
Ama38901PEPTIDASE
Ama38902SIDESTEP PROTEIN
Ama38905
Ama38906INHIBITOR OF APOPTOSIS
Ama38907
Ama38908
Ama38910RNA HELICASE
Ama38911RNA HELICASE
Ama38912VACUOLAR PROTEIN 8
Ama38913
Ama38915
Ama38916TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Ama38917T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Ama38918
Ama38919
Ama38923PROTEIN DISPATCHED-RELATED
Ama38925PLACENTAL PROTEIN 6
Ama38927
Ama38928PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama38929PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama38930
Ama38934REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama38935APPLE DOMAIN-CONTAINING PROTEIN
Ama38936
Ama38937
Ama38938TRANSPOSON
Ama38940ANKYRIN REPEAT FAMILY PROTEIN
Ama38941TRNA 2-SELENOURIDINE SYNTHASE
Ama38942
Ama38943GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Ama38944MATRIN 3/NUCLEAR PROTEIN 220-RELATED
Ama38945HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama38947SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN
Ama38948FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Ama38950LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Ama38952
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