The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38383 | |
Ama38384 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38385 | |
Ama38386 | |
Ama38387 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama38388 | |
Ama38389 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama38390 | |
Ama38391 | |
Ama38394 | |
Ama38395 | GH01354P |
Ama38397 | PROTEIN NATD1 |
Ama38398 | ENOLASE (DUF1399) |
Ama38399 | |
Ama38401 | VESICULAR MANNOSE-BINDING LECTIN |
Ama38402 | DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED |
Ama38403 | |
Ama38404 | GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 |
Ama38405 | |
Ama38406 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama38408 | |
Ama38409 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama38410 | |
Ama38412 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama38413 | INHIBITOR OF APOPTOSIS |
Ama38414 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama38415 | PUTATIVE-RELATED |
Ama38416 | UNCHARACTERIZED |
Ama38417 | PROPIONYL-COA CARBOXYLASE BETA CHAIN |
Ama38419 | - |
Ama38420 | |
Ama38421 | G-PROTEIN COUPLED RECEPTOR |
Ama38422 | |
Ama38423 | |
Ama38424 | |
Ama38425 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama38426 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38427 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38428 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama38429 | THAP DOMAIN PROTEIN |
Ama38430 | ATP-DEPENDENT DNA HELICASE |
Ama38431 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama38432 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama38433 | |
Ama38434 | |
Ama38435 | ZINC FINGER PROTEIN |
Ama38436 | |
Ama38437 | |
Ama38438 | |
Ama38439 |