The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama38183 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Ama38184 | TRANSPOSON |
Ama38185 | |
Ama38188 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama38189 | FRIZZLED |
Ama38190 | ATP-DEPENDENT RNA HELICASE |
Ama38191 | |
Ama38192 | DIHYDROFOLATE REDUCTASE |
Ama38193 | DIHYDROFOLATE REDUCTASE |
Ama38194 | ARMADILLO-TYPE FOLD-RELATED |
Ama38195 | ALPHA-MANNOSIDASE |
Ama38196 | ALPHA-MANNOSIDASE |
Ama38197 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Ama38198 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
Ama38199 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama381_5db7b01a | NITRIC OXIDE SYNTHASE-RELATED |
Ama38200 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama38201 | |
Ama38205 | SLR1441 PROTEIN |
Ama38206 | NAD(P)H-HYDRATE EPIMERASE |
Ama38208 | |
Ama38209 | ALPHA-MANNOSIDASE |
Ama38210 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
Ama38214 | SYNPHILIN-1 |
Ama38215 | RALA BINDING PROTEIN 1 RALBP1 |
Ama38216 | |
Ama38218 | GH28348P |
Ama38219 | GH28348P |
Ama38220 | KELCH DOMAIN-CONTAINING PROTEIN |
Ama38221 | |
Ama38222 | NXPE FAMILY MEMBER |
Ama38224 | |
Ama38225 | |
Ama38226 | |
Ama38227 | G-PROTEIN COUPLED RECEPTOR |
Ama38228 | |
Ama38230 | |
Ama38231 | |
Ama38232 | NXPE FAMILY MEMBER |
Ama38233 | NXPE FAMILY MEMBER |
Ama38234 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama38235 | |
Ama38236 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama38237 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
Ama38238 | NXPE FAMILY MEMBER |
Ama38239 | NXPE FAMILY MEMBER |
Ama38240 | NXPE FAMILY MEMBER |
Ama38241 | PROPERDIN |
Ama38242 | ZINC FINGER PROTEIN 142 |
Ama38243 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 1 |