The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37785 | |
Ama37786 | |
Ama37787 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37788 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37791 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37792 | PEPTIDASE |
Ama37793 | PEPTIDASE |
Ama37795 | PEPTIDASE |
Ama37796 | |
Ama37797 | |
Ama37798 | |
Ama37799 | PEPTIDASE |
Ama377_5db7b01a | |
Ama37800 | PEPTIDASE |
Ama37801 | |
Ama37803 | |
Ama37804 | |
Ama37805 | PEPTIDASE |
Ama37807 | PEPTIDASE |
Ama37808 | PEPTIDASE |
Ama37809 | |
Ama37810 | |
Ama37811 | TRANSPOSON |
Ama37812 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37813 | |
Ama37814 | EARLY ENDOSOME ANTIGEN 1 |
Ama37815 | LORICRIN |
Ama37816 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37818 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37821 | |
Ama37822 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
Ama37830 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37831 | PUTATIVE-RELATED |
Ama37832 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama37834 | |
Ama37835 | |
Ama37836 | |
Ama37837 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37839 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama37842 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama37843 | |
Ama37844 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama37845 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37846 | BONUS, ISOFORM C-RELATED |
Ama37849 | |
Ama37850 | UNCHARACTERIZED |
Ama37851 | |
Ama37852 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama37853 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37854 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |