The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37580 | PROTEIN CBG22215 |
Ama37582 | |
Ama37583 | PLASMINOGEN-RELATED |
Ama37584 | PROTEIN CBG22215 |
Ama37585 | |
Ama37586 | |
Ama37587 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama37588 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37589 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37591 | |
Ama37592 | |
Ama37593 | |
Ama37594 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
Ama37595 | |
Ama37596 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama37597 | |
Ama37598 | |
Ama37599 | |
Ama37603 | |
Ama37606 | MATING RESPONSE PROTEIN POI2 |
Ama37607 | G-PROTEIN COUPLED RECEPTOR |
Ama37608 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama37609 | POU DOMAIN CLASS 2-ASSOCIATING FACTOR 1 |
Ama37612 | |
Ama37613 | |
Ama37614 | PROTOPORPHYRINOGEN OXIDASE |
Ama37616 | |
Ama37617 | |
Ama37618 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37619 | |
Ama37620 | CARBOHYDRATE SULFOTRANSFERASE |
Ama37621 | - |
Ama37622 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37624 | BONUS, ISOFORM C-RELATED |
Ama37626 | UNCHARACTERIZED |
Ama37627 | |
Ama37628 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama37629 | |
Ama37630 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Ama37631 | |
Ama37632 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama37633 | DULLARD PROTEIN PHOSPHATASE |
Ama37634 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama37635 | BLR6086 PROTEIN |
Ama37636 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37638 | |
Ama37639 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37641 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37642 | CARBOHYDRATE SULFOTRANSFERASE |
Ama37643 | ARYLSULFATASE |