The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37719 | - |
Ama37721 | |
Ama37722 | TRANSPOSON |
Ama37723 | |
Ama37726 | THAP DOMAIN PROTEIN |
Ama37727 | |
Ama37728 | THAP DOMAIN PROTEIN |
Ama37731 | |
Ama37732 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama37733 | PLACENTAL PROTEIN 6 |
Ama37736 | |
Ama37737 | |
Ama37738 | PLACENTAL PROTEIN 6 |
Ama37739 | BONUS, ISOFORM C-RELATED |
Ama37740 | |
Ama37741 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama37742 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama37743 | |
Ama37744 | TRANSPOSON |
Ama37747 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37749 | |
Ama37750 | |
Ama37751 | |
Ama37752 | TRANSPOSON |
Ama37753 | |
Ama37754 | TRANSPOSON |
Ama37755 | |
Ama37756 | TRANSPOSON |
Ama37757 | TRANSPOSON |
Ama37758 | BONUS, ISOFORM C-RELATED |
Ama37759 | |
Ama37760 | BONUS, ISOFORM C-RELATED |
Ama37763 | BONUS, ISOFORM C-RELATED |
Ama37764 | |
Ama37765 | |
Ama37766 | TRANSPOSON |
Ama37767 | |
Ama37770 | TRANSPOSON |
Ama37771 | |
Ama37772 | |
Ama37773 | PLACENTAL PROTEIN 6 |
Ama37774 | TRANSPOSON |
Ama37775 | - |
Ama37776 | |
Ama37777 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37778 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37780 | |
Ama37782 | |
Ama37783 | BONUS, ISOFORM C-RELATED |
Ama37784 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |