The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37915 | |
Ama37916 | TRANSPOSON |
Ama37917 | THAP DOMAIN PROTEIN |
Ama37918 | THAP DOMAIN PROTEIN |
Ama37919 | |
Ama37923 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama37924 | |
Ama37925 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37927 | KINESIN-RELATED |
Ama37928 | |
Ama37929 | |
Ama37930 | |
Ama37932 | TRANSPOSON |
Ama37935 | |
Ama37936 | |
Ama37938 | PROTEIN CBG22215 |
Ama37939 | |
Ama37943 | THAP DOMAIN PROTEIN |
Ama37944 | |
Ama37945 | THAP DOMAIN PROTEIN |
Ama37947 | |
Ama37948 | |
Ama37950 | PLACENTAL PROTEIN 6 |
Ama37952 | |
Ama37953 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37954 | |
Ama37955 | |
Ama37956 | THAP DOMAIN PROTEIN |
Ama37957 | |
Ama37958 | |
Ama37959 | THAP DOMAIN PROTEIN |
Ama37960 | |
Ama37961 | |
Ama37962 | THAP DOMAIN PROTEIN |
Ama37963 | |
Ama37964 | |
Ama37965 | |
Ama37966 | |
Ama37967 | PUTATIVE-RELATED |
Ama37968 | |
Ama37970 | |
Ama37972 | THAP DOMAIN PROTEIN |
Ama37973 | |
Ama37975 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37976 | |
Ama37977 | THAP DOMAIN PROTEIN |
Ama37978 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37980 | |
Ama37981 | SENTRIN/SUMO-SPECIFIC PROTEASE |
Ama37982 |