The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37855 | |
Ama37856 | TRANSPOSABLE ELEMENT-RELATED |
Ama37857 | |
Ama37858 | |
Ama37859 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37860 | TRANSPOSON |
Ama37861 | |
Ama37862 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama37863 | ATP-DEPENDENT DNA HELICASE |
Ama37864 | THAP DOMAIN PROTEIN |
Ama37866 | |
Ama37867 | |
Ama37868 | |
Ama37870 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama37871 | PUTATIVE-RELATED |
Ama37873 | |
Ama37874 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37876 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37878 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37879 | |
Ama37880 | |
Ama37881 | |
Ama37882 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37883 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama37884 | |
Ama37888 | |
Ama37889 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37890 | PUTATIVE-RELATED |
Ama37891 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37892 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37893 | |
Ama37894 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37895 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37896 | |
Ama37897 | |
Ama37899 | PEPTIDASE |
Ama378_5db7b01a | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Ama37900 | |
Ama37901 | PEPTIDASE |
Ama37902 | |
Ama37903 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37904 | PUTATIVE-RELATED |
Ama37905 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama37906 | |
Ama37908 | |
Ama37909 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37910 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama37911 | |
Ama37912 | |
Ama37914 | L1 TRANSPOSABLE ELEMENT-RELATED |