The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37441 | LP04239P |
Ama37443 | |
Ama37444 | |
Ama37445 | |
Ama37447 | LP04239P |
Ama37448 | |
Ama37450 | |
Ama37451 | XANTHINE DEHYDROGENASE |
Ama37452 | BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN |
Ama37454 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 |
Ama37455 | |
Ama37456 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37457 | |
Ama37459 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
Ama37460 | UNCHARACTERIZED |
Ama37462 | |
Ama37463 | SOLUTE CARRIER FAMILY 25 |
Ama37464 | |
Ama37465 | LD44762P |
Ama37466 | |
Ama37467 | |
Ama37468 | |
Ama37471 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama37472 | |
Ama37473 | PEPTIDASE |
Ama37474 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
Ama37476 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
Ama37477 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
Ama37478 | |
Ama37479 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
Ama37480 | - |
Ama37481 | |
Ama37482 | TRANSPOSON |
Ama37483 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama37486 | ORNITHINE DECARBOXYLASE ANTIZYME |
Ama37490 | TARGET OF ERK KINASE MPK-1 |
Ama37492 | TROPOMODULIN |
Ama37493 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama37494 | |
Ama37495 | UNCHARACTERIZED |
Ama37496 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama37497 | DYNEIN HEAVY CHAIN |
Ama37498 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama37499 | UNCHARACTERIZED |
Ama374_5db7b01a | ALKALINE CERAMIDASE 3 |
Ama37500 | DYNEIN HEAVY CHAIN |
Ama37501 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama37502 | DYNEIN HEAVY CHAIN |
Ama37504 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
Ama37508 | EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED |