The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama37035 | CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER |
Ama37036 | |
Ama37038 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
Ama37039 | |
Ama37042 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama37043 | |
Ama37044 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
Ama37045 | G-PROTEIN COUPLED RECEPTOR |
Ama37046 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama37048 | ZGC:136858 |
Ama37049 | FAS-ASSOCIATED PROTEIN |
Ama37050 | |
Ama37052 | MRNA-CAPPING ENZYME |
Ama37053 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Ama37054 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN |
Ama37056 | |
Ama37057 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama37058 | HYDROXYMETHYLGLUTARYL-COA LYASE |
Ama37059 | AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 |
Ama37060 | TETRATRICOPEPTIDE REPEAT PROTEIN |
Ama37061 | TETRATRICOPEPTIDE REPEAT PROTEIN |
Ama37062 | RAD52 MOTIF-CONTAINING PROTEIN 1 |
Ama37063 | EG:80H7.2 PROTEIN |
Ama37064 | EG:80H7.2 PROTEIN |
Ama37065 | DIPHOSPHOMEVALONATE DECARBOXYLASE |
Ama37066 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Ama37067 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 |
Ama37068 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
Ama37069 | |
Ama37070 | |
Ama37072 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama37073 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37074 | DOPAMINE BETA HYDROXYLASE RELATED |
Ama37076 | |
Ama37077 | |
Ama37078 | NUCLEOTIDE KINASE |
Ama37079 | MYOTUBULARIN-RELATED |
Ama37082 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama37084 | TRANSCRIPTIONAL ADAPTER 3-RELATED |
Ama37085 | SLR0304 PROTEIN |
Ama37087 | BYSTIN |
Ama37088 | - |
Ama37089 | PKSB |
Ama37091 | |
Ama37092 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Ama37094 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Ama37095 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Ama37096 | MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 |
Ama37097 | |
Ama37099 |