The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama36918 | |
Ama36919 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Ama36920 | |
Ama36921 | |
Ama36923 | |
Ama36924 | |
Ama36925 | FI21225P1 |
Ama36926 | |
Ama36927 | |
Ama36928 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
Ama36929 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
Ama36930 | TRANSCRIPTION FACTOR E2F |
Ama36932 | FI19480P1 |
Ama36933 | FI19480P1 |
Ama36934 | FAT ATYPICAL CADHERIN-RELATED |
Ama36935 | GABA-B RECEPTOR |
Ama36937 | GABA-B RECEPTOR |
Ama36938 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama36939 | INHIBITOR OF APOPTOSIS |
Ama36940 | |
Ama36941 | |
Ama36942 | TOLL-LIKE RECEPTOR |
Ama36943 | HEAT SHOCK PROTEIN 70KDA |
Ama36944 | ARMET-LIKE PROTEIN |
Ama36946 | TOLL-LIKE RECEPTOR |
Ama36947 | MITOCHONDRIAL RIBOSOMAL PROTEIN L30 |
Ama36948 | |
Ama36949 | |
Ama36950 | |
Ama36951 | |
Ama36952 | UNCHARACTERIZED NODULIN-LIKE PROTEIN |
Ama36953 | |
Ama36954 | |
Ama36955 | PUTATIVE-RELATED |
Ama36956 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama36957 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama36958 | THAP DOMAIN PROTEIN |
Ama36959 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama36960 | ATP-DEPENDENT DNA HELICASE |
Ama36961 | |
Ama36962 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
Ama36965 | |
Ama36966 | PROTEIN ARGININE N-METHYLTRANSFERASE |
Ama36967 | TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN |
Ama36968 | |
Ama36969 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
Ama36970 | |
Ama36971 | |
Ama36972 | GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT |
Ama36973 |