The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama36791 | ARMADILLO-TYPE FOLD-RELATED |
Ama36792 | AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28 |
Ama36793 | BETA1,3-GALACTOSYLTRANSFERASE |
Ama36794 | PLACENTAL PROTEIN 11-RELATED |
Ama36798 | ALPHA-AMYLASE |
Ama36799 | CYTOCHROME P450 508A4-RELATED |
Ama36801 | HILLARIN |
Ama36802 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
Ama36803 | ZINC FINGER PROTEIN 200 |
Ama36806 | WD40 REPEAT PROTEIN |
Ama36808 | |
Ama36809 | |
Ama36810 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED |
Ama36811 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
Ama36812 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama36813 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama36814 | |
Ama36815 | SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT |
Ama36816 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama36817 | T-BOX PROTEIN-RELATED |
Ama36818 | |
Ama36819 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
Ama36821 | |
Ama36823 | |
Ama36825 | SAL-LIKE PROTEIN |
Ama36826 | |
Ama36827 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
Ama36828 | |
Ama36830 | CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A |
Ama36831 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama36832 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama36833 | CYCLIN |
Ama36834 | SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED |
Ama36835 | UNCHARACTERIZED |
Ama36836 | METHYLENETETRAHYDROFOLATE REDUCTASE |
Ama36837 | |
Ama36838 | |
Ama36839 | F-BOX ONLY PROTEIN 48-RELATED |
Ama36840 | UNCHARACTERIZED |
Ama36841 | UNCHARACTERIZED |
Ama36843 | ZINC FINGER PROTEIN |
Ama36844 | ZINC FINGER PROTEIN ZIC AND GLI |
Ama36845 | LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED |
Ama36846 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama36847 | UNCHARACTERIZED |
Ama36848 | UNCHARACTERIZED |
Ama36849 | |
Ama36850 | |
Ama36851 | REVERSE TRANSCRIPTASES |
Ama36852 |