The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama36974 | TUBULIN |
Ama36975 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Ama36976 | ZINC FINGER HOMEOBOX PROTEIN |
Ama36977 | TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN |
Ama36978 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Ama36979 | |
Ama36980 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama36981 | AGAP005574-PA |
Ama36982 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama36983 | AGAP001331-PA-RELATED |
Ama36984 | N-ACYLGLUCOSAMINE-2-EPIMERASE |
Ama36985 | - |
Ama36986 | AQUAPORIN TRANSPORTER |
Ama36988 | ACTIVATOR OF BASAL TRANSCRIPTION 1 |
Ama36989 | |
Ama36990 | |
Ama36992 | |
Ama36994 | RNA BINDING PROTEIN PUMILIO-RELATED |
Ama36995 | |
Ama36997 | |
Ama36998 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
Ama36999 | |
Ama369_5db7b01a | LUNG ADENOMA SUSCEPTIBILITY 1-RELATED |
Ama36_5db7b01a | WD40 REPEAT PROTEIN |
Ama36_5db84494 | RHOPHILIN |
Ama37000 | |
Ama37002 | |
Ama37006 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama37007 | |
Ama37010 | TRANSLATION INITIATION FACTOR EIF-2B |
Ama37013 | UNCHARACTERIZED |
Ama37014 | |
Ama37015 | |
Ama37017 | G-PROTEIN COUPLED RECEPTOR |
Ama37018 | |
Ama37019 | |
Ama37020 | |
Ama37021 | ZINC FINGER PROTEIN 142 |
Ama37022 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama37023 | UNCHARACTERIZED |
Ama37024 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28 |
Ama37025 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
Ama37026 | BONE MARROW PROTEOGLYCAN |
Ama37027 | TIP120 |
Ama37029 | AGAP008170-PA |
Ama37030 | |
Ama37031 | HEH2P |
Ama37032 | AGAP001705-PA |
Ama37033 | ORGANIC ANION TRANSPORTER |
Ama37034 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |