About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama3672552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama36726U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN
Ama36727TETRATRICOPEPTIDE REPEAT PROTEIN 32
Ama36728FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
Ama36729RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE
Ama36742PUTATIVE-RELATED
Ama36743
Ama36744
Ama36745
Ama36747
Ama36748
Ama36749FMRFAMIDE RECEPTOR-RELATED
Ama36750
Ama36751ZINC FINGER PROTEIN
Ama36752DEOXYRIBONUCLEASE TATDN2-RELATED
Ama36753ENDONUCLEASE-RELATED
Ama36754ZINC FINGER PROTEIN
Ama36755DUF3504 DOMAIN-CONTAINING PROTEIN
Ama36756
Ama36757REVERSE TRANSCRIPTASES
Ama36758REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama36759BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 5
Ama36760
Ama36761SD08549P
Ama36762
Ama36763EXPRESSED PROTEIN
Ama36765ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Ama36766DED DOMAIN-CONTAINING PROTEIN
Ama36767DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Ama36768RIBOPHORIN II
Ama36770RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Ama36771NHL REPEAT-CONTAINING PROTEIN-RELATED
Ama36772ORGANIC ANION TRANSPORTER
Ama36773PARANEOPLASTIC ANTIGEN
Ama36774CALCIUM BINDING PROTEIN
Ama36775FAT ATYPICAL CADHERIN-RELATED
Ama36776
Ama36777RNA BINDING PROTEIN
Ama36778FI01416P
Ama36779ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Ama36780THAP DOMAIN PROTEIN
Ama36781EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama36782
Ama36783-
Ama36784
Ama36785PARANEOPLASTIC ANTIGEN
Ama36786INTEGRIN ALPHA
Ama36788POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4
Ama36789POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4
Ama36790
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