About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama36294
Ama36296
Ama36297MUCIN 26B
Ama36298PUTATIVE-RELATED
Ama36299TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Ama362_5db7b01a
Ama36303TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Ama36306DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
Ama36307REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama36308SERINE INCORPORATOR
Ama36309PUTATIVE HOMEODOMAIN TRANSCRIPTION FACTOR PHTF
Ama36310
Ama36311
Ama36312MYOSIN LIGHT CHAIN 1, 3
Ama36314VOLTAGE-GATED POTASSIUM CHANNEL
Ama36318SIMILAR TO HYPOTHETICAL PROTEIN
Ama36319
Ama36320
Ama363231-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE
Ama36324
Ama36325SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama36326
Ama36327THAP DOMAIN PROTEIN
Ama36328EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama36329ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Ama36330GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Ama36331
Ama36332THAP DOMAIN PROTEIN
Ama36333EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama36334ATP-DEPENDENT DNA HELICASE
Ama36335THAP DOMAIN PROTEIN
Ama36336
Ama36337
Ama36338G-PROTEIN COUPLED RECEPTOR
Ama36339AGAP008005-PA
Ama36340
Ama36341
Ama3634552 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama36347CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama36352
Ama36353G-PROTEIN COUPLED RECEPTOR
Ama36354UNCHARACTERIZED
Ama36355CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama36356NEUROTRANSMITTER GATED ION CHANNEL
Ama36357
Ama36358SAL-LIKE PROTEIN
Ama36360TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Ama36363CAMP-RESPONSIVE ELEMENT-BINDING PROTEIN-LIKE 2
Ama36364DELTA(14)-STEROL REDUCTASE
Ama3636660S RIBOSOMAL PROTEIN L11-RELATED
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