The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama36132 | PROTEASOME INHIBITOR |
Ama36135 | ORGANIC ANION TRANSPORTER |
Ama36139 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama36140 | PROTEIN CBG10425 |
Ama36141 | PROTEIN CBG10425 |
Ama36142 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama36143 | |
Ama36144 | INHIBITOR OF APOPTOSIS |
Ama36147 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama36148 | CASPASE-ACTIVATED DNASE |
Ama36149 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama36150 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama36151 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama36152 | GMP SYNTHASE-RELATED |
Ama36154 | G-PROTEIN COUPLED RECEPTOR |
Ama36156 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama36157 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama36158 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
Ama36159 | |
Ama36161 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
Ama36162 | SYNTROPHIN |
Ama36163 | |
Ama36164 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
Ama36165 | UNCHARACTERIZED |
Ama36166 | |
Ama36167 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
Ama36168 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama36169 | TRANSPOSABLE ELEMENT-RELATED |
Ama36170 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama36171 | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED |
Ama36172 | G-PROTEIN COUPLED RECEPTOR |
Ama36173 | |
Ama36174 | GLUTAMATE CYSTEINE LIGASE |
Ama36175 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama36176 | |
Ama36177 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama36178 | |
Ama36179 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama36180 | SAL-LIKE PROTEIN |
Ama36181 | |
Ama36185 | EPITHELIAL CELL-TRANSFORMING SEQUENCE 2 ONCOGENE-LIKE |
Ama36187 | |
Ama36188 | ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN |
Ama36189 | |
Ama36190 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
Ama36191 | |
Ama36194 | |
Ama36195 | MYOSIN REGULATORY LIGHT CHAIN 2 |
Ama36199 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama361_5db7b01a | UNCHARACTERIZED |