The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35944 | KYNURENINE 3-MONOOXYGENASE |
Ama35945 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama35947 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
Ama35948 | |
Ama35949 | |
Ama35950 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
Ama35951 | BONUS, ISOFORM C-RELATED |
Ama35952 | TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4 |
Ama35954 | BONUS, ISOFORM C-RELATED |
Ama35955 | |
Ama35956 | |
Ama35957 | |
Ama35958 | |
Ama35959 | ATP-DEPENDENT DNA HELICASE |
Ama35960 | BONUS, ISOFORM C-RELATED |
Ama35961 | BONUS, ISOFORM C-RELATED |
Ama35962 | BONUS, ISOFORM C-RELATED |
Ama35967 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama35968 | HISTONE H4 |
Ama35969 | - |
Ama35970 | |
Ama35971 | SOLUTE CARRIER FAMILY 17 |
Ama35972 | - |
Ama35973 | PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE |
Ama35974 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama35975 | |
Ama35976 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama35977 | ARYLSULFATASE |
Ama35978 | ARYLSULFATASE |
Ama35979 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35980 | ARYLSULFATASE |
Ama35981 | ARYLSULFATASE |
Ama35982 | ARYLSULFATASE |
Ama35983 | |
Ama35984 | IDURONATE 2-SULFATASE |
Ama35985 | ARYLSULFATASE |
Ama35986 | TRANSPOSABLE ELEMENT-RELATED |
Ama35987 | |
Ama35988 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
Ama35989 | HISTONE H2A |
Ama35990 | HISTONE H2B |
Ama35991 | HISTONE H3 |
Ama35992 | CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN |
Ama35993 | |
Ama35994 | |
Ama35995 | ARCHEASE |
Ama35996 | G-PROTEIN COUPLED RECEPTOR |
Ama35997 | |
Ama35998 | |
Ama35999 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |