The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35571 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
Ama35572 | LD39211P |
Ama35573 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
Ama35574 | UNCHARACTERIZED |
Ama35575 | NEPHROCYSTIN-4 |
Ama35576 | NEPHROCYSTIN-4 |
Ama35577 | FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED |
Ama35578 | PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED |
Ama35579 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama35580 | |
Ama35581 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35582 | |
Ama35583 | |
Ama35584 | |
Ama35585 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
Ama35586 | SOLUTE CARRIER FAMILY 2 |
Ama35587 | SOLUTE CARRIER FAMILY 2 |
Ama35588 | HEAVY PROTEIN, PUTATIVE-RELATED |
Ama35589 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama35590 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35592 | OSJNBA0013A04.12 PROTEIN |
Ama35593 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35594 | |
Ama35595 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35596 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35597 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35598 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35599 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35600 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35601 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35602 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35603 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35604 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35605 | GUANYLYL CYCLASE |
Ama35606 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35607 | RIBONUCLEASE H1 |
Ama35608 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35609 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35610 | |
Ama35611 | KELCH PROTEIN |
Ama35612 | KELCH PROTEIN |
Ama35613 | |
Ama35614 | PUTATIVE-RELATED |
Ama35616 | E3 UBIQUITIN-PROTEIN LIGASE TRAIP |
Ama35620 | - |
Ama35621 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama35622 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama35623 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama35624 | |
Ama35625 |