The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35445 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama35448 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama35450 | RECEPTOR-BINDING CANCER ANTIGEN EXPRESSED ON SISO CELLS CANCER ASSOCIATED SURFACE ANTIGEN RCAS1 ESTROGEN RECEPTOR-BINDING FRAGMENT- ASSOCIATED GENE 9 PROTEIN |
Ama35451 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C |
Ama35453 | FORKHEAD BOX PROTEIN N3-LIKE PROTEIN-RELATED |
Ama35454 | |
Ama35456 | INHIBITOR OF APOPTOSIS |
Ama35457 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama35458 | G-PROTEIN COUPLED RECEPTOR |
Ama35459 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama35460 | ADP RIBOSYLATION FACTOR-RELATED |
Ama35461 | PIKACHURIN-LIKE PROTEIN |
Ama35462 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Ama35467 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
Ama35468 | KINESIN-LIKE PROTEIN KIF11 |
Ama35469 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Ama35470 | 26S PROTEASOME REGULATORY SUBUNIT |
Ama35471 | ARM REPEAT SUPERFAMILY PROTEIN |
Ama35472 | |
Ama35473 | 26S PROTEASOME REGULATORY SUBUNIT |
Ama35474 | |
Ama35475 | |
Ama35480 | ZINC FINGER PROTEIN |
Ama35481 | |
Ama35482 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
Ama35483 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
Ama35484 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama35485 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama35486 | CYSTEINE DESULFURYLASE FAMILY MEMBER |
Ama35487 | PKSB |
Ama35488 | |
Ama35490 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama35491 | POLYCOMB GROUP PROTEIN |
Ama35492 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
Ama35493 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2 |
Ama35497 | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER |
Ama35498 | |
Ama35499 | PUTATIVE-RELATED |
Ama354_5db7b01a | |
Ama35500 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 35 |
Ama35501 | SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN |
Ama35502 | SIGMA 1-TYPE OPIOID RECEPTOR-RELATED |
Ama35503 | POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED |
Ama35504 | HEH2P |
Ama35505 | CDNA SEQUENCE BC021608 |
Ama35506 | SIGMA 1-TYPE OPIOID RECEPTOR-RELATED |
Ama35507 | |
Ama35508 | CATION-TRANSPORTING ATPASE-RELATED |
Ama35509 | RRM DOMAIN-CONTAINING PROTEIN |
Ama35511 | REVERSE TRANSCRIPTASES |