The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35626 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama35627 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama35628 | NITRATE, FORMATE, IRON DEHYDROGENASE |
Ama35629 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
Ama35630 | VEPH-A/MELTED |
Ama35632 | TESTICULAR SOLUBLE ADENYLYL CYCLASE |
Ama35633 | |
Ama35635 | |
Ama35636 | PUTATIVE-RELATED |
Ama35638 | GUANYLYL CYCLASE |
Ama35639 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Ama35640 | GUANYLYL CYCLASE |
Ama35641 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35642 | ARGININE OR CREATINE KINASE |
Ama35643 | LD44813P |
Ama35645 | GUANYLYL CYCLASE |
Ama35646 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35648 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35649 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama35650 | |
Ama35651 | |
Ama35652 | UNCHARACTERIZED |
Ama35653 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35654 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama35655 | |
Ama35656 | |
Ama35657 | METHIONYL-TRNA FORMYLTRANSFERASE |
Ama35659 | |
Ama35660 | G-PROTEIN COUPLED RECEPTOR |
Ama35662 | |
Ama35663 | |
Ama35664 | FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 20 |
Ama35665 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35666 | BLR2807 PROTEIN |
Ama35667 | |
Ama35668 | |
Ama35669 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35670 | BLR2807 PROTEIN |
Ama35671 | GENE, 49355-RELATED |
Ama35673 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
Ama35674 | |
Ama35675 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35676 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35678 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35680 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35681 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama35682 | AGAP005574-PA |
Ama35683 | DIHYDROOROTASE-RELATED |
Ama35684 | WD-40 REPEAT PROTEIN |
Ama35685 | BETA-1,4-MANNOSYLTRANSFERASE EGH |