The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35686 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama35687 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Ama35688 | |
Ama35689 | |
Ama35690 | |
Ama35691 | PUTATIVE-RELATED |
Ama35692 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Ama35694 | |
Ama35696 | O-ACYLTRANSFERASE |
Ama35698 | |
Ama35699 | TRANSPOSABLE ELEMENT-RELATED |
Ama356_5db7b01a | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35700 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
Ama35702 | PHOSPHOLIPID SCRAMBLASE-RELATED |
Ama35703 | |
Ama35704 | O-ACYLTRANSFERASE |
Ama35705 | |
Ama35706 | DNA LIGASE 1/3 FAMILY MEMBER |
Ama35707 | SLEI FAMILY PROTEIN |
Ama35708 | DNA LIGASE 1/3 FAMILY MEMBER |
Ama35709 | DIAMINE N-ACETYLTRANSFERASE |
Ama35710 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
Ama35711 | PROTEIN RCC2 |
Ama35712 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
Ama35713 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35714 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35715 | |
Ama35716 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama35717 | G-PROTEIN COUPLED RECEPTOR |
Ama35719 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35720 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama35724 | DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE |
Ama35725 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama35726 | RETICULOCALBIN |
Ama35727 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama35728 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
Ama35731 | |
Ama35732 | PHOSPHOSERINE AMINOTRANSFERASE |
Ama35734 | EF-HAND DOMAIN-CONTAINING PROTEIN D |
Ama35735 | |
Ama35736 | |
Ama35737 | DULLARD PROTEIN PHOSPHATASE |
Ama35738 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Ama35740 | SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED |
Ama35741 | SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED |
Ama35742 | ASTEROID PROTEIN |
Ama35745 | UNCHARACTERIZED |
Ama35746 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
Ama35747 | DAMAGE-SPECIFIC DNA BINDING PROTEIN 2 |
Ama35748 | TRIOSEPHOSPHATE ISOMERASE |