The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35883 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama35884 | |
Ama35886 | |
Ama35887 | |
Ama35888 | THAP DOMAIN PROTEIN |
Ama35891 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama35892 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama35894 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama35895 | LIPASE |
Ama35896 | TRANSPOSABLE ELEMENT-RELATED |
Ama35897 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
Ama35899 | PHOSPHATIDYLINOSITOL SYNTHASE |
Ama358_5db7b01a | |
Ama35900 | |
Ama35901 | - |
Ama35902 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35903 | |
Ama35904 | SORTING NEXIN 17 AND 27 |
Ama35905 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER |
Ama35906 | ADENOSINE DEAMINASE |
Ama35907 | |
Ama35908 | TRANSPOSON |
Ama35909 | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR COMPLEX SUBUNIT |
Ama35910 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 |
Ama35911 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama35912 | G-PROTEIN COUPLED RECEPTOR |
Ama35914 | |
Ama35915 | |
Ama35916 | |
Ama35917 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Ama35918 | ASAP FAMILY MEMBER |
Ama35919 | ASAP FAMILY MEMBER |
Ama35921 | OVARIAN CARCINOMA IMMUNOREACTIVE ANTIGEN |
Ama35922 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
Ama35923 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
Ama35924 | N-LINKED OLIGOSACCHARIDE PROCESSING |
Ama35925 | SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED |
Ama35926 | 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL |
Ama35927 | |
Ama35928 | |
Ama35929 | ODD-SKIPPED - RELATED |
Ama35930 | LEUCINE-RICH REPEAT-CONTAINING |
Ama35933 | |
Ama35934 | |
Ama35935 | ENDORIBONUCLEASE LACTB2 |
Ama35936 | NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED |
Ama35937 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama35941 | |
Ama35942 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama35943 |