About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama359_5db7b01aARYLSULFATASE
Ama35_5db7b01aCOMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Ama36000TRANSPOSON
Ama36001ORGANIC ANION TRANSPORTER
Ama36002WD REPEAT-CONTAINING PROTEIN 48
Ama36003CHROMATE REDUCTASE
Ama36004
Ama36005RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama36007
Ama36008RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama36010
Ama36011TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Ama36012ZINC FINGER PROTEIN
Ama36013TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Ama36015
Ama36016ZINC FINGER PROTEIN
Ama36021
Ama36022
Ama36023LOC100145250 PROTEIN
Ama36024NUCLEAR HORMONE RECEPTOR
Ama36025METHYLTRANSFERASE N6AMT1
Ama36027
Ama36028
Ama36029PEPTIDASE
Ama36030
Ama36032
Ama36034PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama36036DYNEIN LIGHT CHAIN ROADBLOCK
Ama36037
Ama36040
Ama36041
Ama36042CATION EFFLUX PROTEIN/ ZINC TRANSPORTER
Ama36043
Ama36044D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Ama36045
Ama36046GEO13361P1-RELATED
Ama36047
Ama36049
Ama36050TUMOR NECROSIS FACTOR INDUCED PROTEIN
Ama36052DNA-BINDING PROTEIN SATB FAMILY MEMBER
Ama36053V-TYPE PROTON ATPASE SUBUNIT H
Ama36054TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Ama36055V-TYPE PROTON ATPASE SUBUNIT H
Ama36056COATOMER SUBUNIT GAMMA
Ama36058-
Ama36059EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama36060PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama36061
Ama36064CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Ama36065
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