The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama35176 | PLASMINOGEN-RELATED |
Ama35177 | |
Ama35179 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35180 | |
Ama35181 | |
Ama35182 | PLASMINOGEN-RELATED |
Ama35183 | PLASMINOGEN-RELATED |
Ama35184 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35185 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35186 | |
Ama35187 | MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 |
Ama35188 | FAM11A, B PROTEIN |
Ama35189 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Ama35190 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama35194 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
Ama35195 | G-PROTEIN COUPLED RECEPTOR |
Ama35196 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35197 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35198 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama35199 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama351_5db7b01a | CYTIDINE DEAMINASE |
Ama35200 | APPLE DOMAIN-CONTAINING PROTEIN |
Ama35201 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35202 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35203 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35204 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35206 | |
Ama35207 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35209 | |
Ama35210 | |
Ama35211 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama35212 | |
Ama35213 | |
Ama35215 | |
Ama35216 | SCAVENGER RECEPTOR CLASS F |
Ama35217 | MITOCHONDRIAL METAL TRANSPORTER 1-RELATED |
Ama35218 | HILLARIN |
Ama35219 | |
Ama35220 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama35221 | - |
Ama35223 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama35226 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Ama35233 | |
Ama35235 | SEGMENT POLARITY PROTEIN DISHEVELLED |
Ama35238 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Ama35240 | BCAS2 PROTEIN |
Ama35241 | RNA RECOGNITION MOTIF-CONTAINING |
Ama35242 | RNA RECOGNITION MOTIF-CONTAINING |
Ama35244 | UNCHARACTERIZED |
Ama35249 | AMINOTRANSFERASE |