The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34824 | |
Ama34825 | |
Ama34826 | |
Ama34827 | TRANSPOSON |
Ama34828 | |
Ama34829 | |
Ama34830 | |
Ama34839 | |
Ama34840 | BETA-1,4-MANNOSYLTRANSFERASE EGH |
Ama34841 | |
Ama34842 | |
Ama34843 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama34845 | |
Ama34846 | |
Ama34847 | |
Ama34848 | |
Ama34850 | PSEUDOURIDYLATE SYNTHASE |
Ama34854 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama34855 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama34856 | 5'->3' EXORIBONUCLEASE |
Ama34858 | |
Ama34859 | REVERSE TRANSCRIPTASES |
Ama34860 | THAP DOMAIN PROTEIN |
Ama34862 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama34863 | THAP DOMAIN PROTEIN |
Ama34864 | TRANSPOSON |
Ama34865 | |
Ama34866 | MOLTING PROTEIN MLT-4 |
Ama34867 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama34868 | |
Ama34870 | SLEI FAMILY PROTEIN |
Ama34871 | |
Ama34872 | TRANSPOSON |
Ama34873 | |
Ama34874 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34875 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34884 | TRANSPOSABLE ELEMENT-RELATED |
Ama34885 | |
Ama34886 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama34887 | |
Ama34888 | |
Ama34889 | |
Ama34892 | ATP-DEPENDENT DNA HELICASE |
Ama34893 | |
Ama34894 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34895 | |
Ama34896 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
Ama34897 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34898 | |
Ama348_5db7b01a |