The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34603 | |
Ama34604 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
Ama34605 | |
Ama34606 | |
Ama34608 | |
Ama34609 | SI:CH211-262H13.3-RELATED-RELATED |
Ama34610 | BONUS, ISOFORM C-RELATED |
Ama34611 | |
Ama34612 | BONUS, ISOFORM C-RELATED |
Ama34613 | G-PROTEIN COUPLED RECEPTOR |
Ama34614 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34616 | DELTA(14)-STEROL REDUCTASE |
Ama34617 | |
Ama34618 | |
Ama34619 | XYLOSIDE XYLOSYLTRANSFERASE 1 |
Ama34620 | BONUS, ISOFORM C-RELATED |
Ama34622 | BONUS, ISOFORM C-RELATED |
Ama34623 | |
Ama34624 | CYTIDINE DEAMINASE |
Ama34625 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
Ama34628 | MIGRATION AND INVASION-INHIBITORY PROTEIN |
Ama34630 | MYELOID LEUKEMIA FACTOR |
Ama34635 | ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 12 |
Ama34636 | |
Ama34638 | UREASE ACCESSORY PROTEIN D |
Ama34639 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34641 | SULFOTRANSFERASE SULT |
Ama34642 | SULFOTRANSFERASE SULT |
Ama34643 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama34645 | |
Ama34646 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
Ama34648 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
Ama34649 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
Ama34650 | |
Ama34652 | P-SELECTIN GLYCOPROTEIN LIGAND-1 |
Ama34653 | |
Ama34657 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
Ama34658 | |
Ama34659 | TRANSPOSON |
Ama34660 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
Ama34663 | |
Ama34666 | |
Ama34667 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama34669 | |
Ama34670 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
Ama34671 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
Ama34673 | FORKHEAD BOX PROTEIN |
Ama34675 | BICOID-INTERACTING PROTEIN RELATED |
Ama34678 | ZINC FINGER PROTEIN |
Ama34679 | - |