The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34280 | |
Ama34285 | |
Ama34286 | |
Ama34287 | |
Ama34288 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama34289 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama34290 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
Ama34293 | PEPTIDASE |
Ama34294 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama34295 | |
Ama34296 | |
Ama34298 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34300 | TATA-BOX BINDING PROTEIN |
Ama34301 | |
Ama34302 | |
Ama34305 | |
Ama34306 | |
Ama34307 | |
Ama34308 | |
Ama34310 | |
Ama34311 | |
Ama34312 | |
Ama34314 | |
Ama34315 | |
Ama34316 | |
Ama34317 | PEPTIDASE |
Ama34318 | |
Ama34319 | |
Ama34320 | |
Ama34322 | ZGC:195170 |
Ama34323 | SI:CH211-108C17.2-RELATED-RELATED |
Ama34324 | |
Ama34325 | |
Ama34326 | |
Ama34327 | |
Ama34328 | |
Ama34329 | TATA-BOX BINDING PROTEIN |
Ama34330 | ALKALINE PHOSPHATASE |
Ama34331 | |
Ama34332 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34333 | |
Ama34334 | |
Ama34335 | |
Ama34336 | |
Ama34337 | |
Ama34339 | TRANSMEMBRANE PROTEIN 2-RELATED |
Ama34340 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama34341 | |
Ama34342 | |
Ama34343 |