The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34483 | |
Ama34484 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama34485 | |
Ama34486 | |
Ama34487 | G-PROTEIN COUPLED RECEPTOR |
Ama34488 | RECEPTOR TRANSPORTING PROTEIN |
Ama34489 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
Ama34491 | NUCLEOLAR PROTEIN 7 |
Ama34492 | COILED-COIL DOMAIN-CONTAINING PROTEIN 150 |
Ama34493 | UNCHARACTERIZED |
Ama34495 | HEAT SHOCK PROTEIN 70KDA |
Ama34496 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
Ama34497 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
Ama34498 | DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE |
Ama34499 | GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN |
Ama344_5db7b01a | TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED |
Ama34500 | GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN |
Ama34501 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34502 | EXOCYST COMPLEX COMPONENT 8 |
Ama34504 | EPH RECEPTOR A5 |
Ama34506 | ZGC:195170 |
Ama34507 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama34510 | |
Ama34512 | |
Ama34513 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama34514 | THAP DOMAIN PROTEIN |
Ama34515 | AGAP005574-PA |
Ama34516 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama34517 | |
Ama34518 | CATION-TRANSPORTING ATPASE-RELATED |
Ama34519 | ACETYLTRANSFERASE, GNAT FAMILY |
Ama34521 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama34522 | REVERSE TRANSCRIPTASES |
Ama34523 | |
Ama34524 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34525 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34526 | UNCHARACTERIZED |
Ama34527 | PUTATIVE-RELATED |
Ama34528 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34529 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34530 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22 |
Ama34531 | UNCHARACTERIZED |
Ama34532 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama34533 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama34534 | |
Ama34535 | ACETYL-COA HYDROLASE-RELATED |
Ama34536 | G-PROTEIN COUPLED RECEPTOR |
Ama34537 | ACETYL-COA HYDROLASE-RELATED |
Ama34538 | ACETYL-COA HYDROLASE-RELATED |
Ama34539 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |