The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
| Gene ID | Description |
|---|---|
| Ama34346 | |
| Ama34347 | |
| Ama34349 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
| Ama34350 | INHIBITOR OF APOPTOSIS |
| Ama34351 | |
| Ama34352 | |
| Ama34353 | |
| Ama34354 | |
| Ama34355 | |
| Ama34356 | |
| Ama34357 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| Ama34359 | |
| Ama34361 | |
| Ama34362 | |
| Ama34364 | UNCHARACTERIZED |
| Ama34365 | SPERMIDINE/SPERMINE SYNTHASE |
| Ama34366 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| Ama34367 | |
| Ama34369 | |
| Ama34371 | |
| Ama34372 | |
| Ama34373 | DNA REPAIR PROTEIN REV1 |
| Ama34378 | |
| Ama34379 | |
| Ama34380 | DELTA(14)-STEROL REDUCTASE |
| Ama34381 | |
| Ama34382 | RIBOSOMAL PROTEIN S6 KINASE |
| Ama34384 | F-ACTIN-CAPPING PROTEIN SUBUNIT BETA |
| Ama34386 | |
| Ama34387 | GRB10 INTERACTING GYF PROTEIN |
| Ama34388 | GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA |
| Ama34389 | COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 |
| Ama34390 | |
| Ama34394 | KAZRIN-RELATED |
| Ama34395 | |
| Ama34397 | CORTISTATIN |
| Ama34398 | CELL DEATH ACTIVATOR CIDE |
| Ama34399 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
| Ama34400 | PR DOMAIN ZINC FINGER PROTEIN |
| Ama34401 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
| Ama34403 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
| Ama34404 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Ama34405 | |
| Ama34406 | |
| Ama34407 | |
| Ama34408 | |
| Ama34410 | |
| Ama34411 | SMALL VASOHIBIN-BINDING PROTEIN |
| Ama34412 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| Ama34413 | ZINC FINGER PROTEIN |
