The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama34127 | ZINC FINGER PROTEIN |
Ama34128 | |
Ama34129 | |
Ama34131 | |
Ama34132 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
Ama34133 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama34134 | |
Ama34135 | |
Ama34138 | |
Ama34139 | |
Ama34140 | SERINE/THREONINE-PROTEIN KINASE TAO |
Ama34141 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama34143 | SERINE/ARGININE-RELATED PROTEIN 53 |
Ama34145 | |
Ama34146 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Ama34147 | |
Ama34148 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Ama34149 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Ama34150 | |
Ama34154 | - |
Ama34155 | SI:CH211-171H4.7-RELATED |
Ama34157 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama34158 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
Ama34159 | |
Ama34161 | |
Ama34162 | TRANSCRIPTION FACTOR DP |
Ama34164 | DIACYLGLYCEROL O-ACYLTRANSFERASE |
Ama34165 | TATA-BOX BINDING PROTEIN |
Ama34166 | ARYLSULFATASE FAMILY MEMBER |
Ama34167 | ARYLSULFATASE FAMILY MEMBER |
Ama34168 | ARYLSULFATASE FAMILY MEMBER |
Ama34170 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama34172 | |
Ama34173 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama34176 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama34177 | |
Ama34178 | |
Ama34182 | |
Ama34184 | MYOSIN |
Ama34187 | |
Ama34191 | PROTEIN CBG10425 |
Ama34192 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama34193 | |
Ama34194 | |
Ama34195 | |
Ama34196 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama34197 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama34198 | |
Ama341_5db7b01a | MYOSIN LIGHT CHAIN 1, 3 |
Ama34201 | UNCHARACTERIZED |