The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33866 | S-FORMYLGLUTATHIONE HYDROLASE |
Ama33867 | |
Ama33868 | |
Ama33871 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
Ama33873 | SERINE/THREONINE-PROTEIN KINASE |
Ama33875 | AMINO ACID TRANSPORTER |
Ama33876 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Ama33877 | UNCHARACTERIZED |
Ama33878 | DEDICATOR OF CYTOKINESIS DOCK |
Ama33879 | SI:DKEY-19B23.7 |
Ama33880 | TRANSPOSON |
Ama33881 | GLYPICAN |
Ama33885 | PHOSPHATIDYLINOSITOL GLYCAN |
Ama33886 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
Ama33887 | GLUTATHIONE S-TRANSFERASE KAPPA |
Ama33888 | QUINONE OXIDOREDUCTASE |
Ama33889 | ALKALINE CERAMIDASE 3 |
Ama33890 | DYNEIN HEAVY CHAIN |
Ama33891 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
Ama33892 | CYTIDYLYLTRANSFERASE |
Ama33893 | DNA POLYMERASE ALPHA CATALYTIC SUBUNIT |
Ama33894 | ELONGATION FACTOR G, MITOCHONDRIAL |
Ama33895 | TUBULIN |
Ama33896 | TUBULIN |
Ama33897 | POLY [ADP-RIBOSE] POLYMERASE |
Ama33898 | PUTATIVE-RELATED |
Ama33899 | 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 |
Ama338_5db7b01a | ADENYLOSUCCINATE SYNTHETASE |
Ama33900 | CYTOKINESIS PROTEIN 3 |
Ama33901 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
Ama33902 | JITTERBUG, ISOFORM N |
Ama33903 | JITTERBUG, ISOFORM N |
Ama33904 | JITTERBUG, ISOFORM N |
Ama33906 | JITTERBUG, ISOFORM N |
Ama33907 | JITTERBUG, ISOFORM N |
Ama33908 | |
Ama33910 | CENTROMERE PROTEIN I |
Ama33911 | |
Ama33912 | |
Ama33913 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
Ama33914 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama33915 | |
Ama33916 | |
Ama33917 | CELL DIVISION PROTEIN KINASE |
Ama33918 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3 |
Ama33919 | THIOESTERASE |
Ama33920 | UNCHARACTERIZED |
Ama33921 | DAP3-BINDING CELL DEATH ENHANCER 1 |
Ama33922 | GH11358P |
Ama33923 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |