The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33729 | BONUS, ISOFORM C-RELATED |
Ama33730 | |
Ama33731 | |
Ama33733 | KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY B MEMBER 1 |
Ama33734 | MONOCARBOXYLATE TRANSPORTER |
Ama33735 | TUBULIN |
Ama33736 | |
Ama33737 | BRCA2-INTERACTING TRANSCRIPTIONAL REPRESSOR EMSY |
Ama33739 | RAGULATOR COMPLEX PROTEIN LAMTOR4 |
Ama33740 | THAP4 PROTEIN |
Ama33741 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
Ama33742 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama33743 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
Ama33745 | DUDULIN-RELATED |
Ama33746 | |
Ama33747 | UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING |
Ama33748 | |
Ama33750 | IMPORTIN BETA |
Ama33751 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
Ama33752 | GALACTOSE-3-O-SULFOTRANSFERASE |
Ama33753 | IONOTROPIC RECEPTOR 20A-RELATED |
Ama33755 | CARBONIC ANHYDRASE |
Ama33756 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33757 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33758 | CADHERIN-87A |
Ama33760 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama33761 | IONOTROPIC RECEPTOR 20A-RELATED |
Ama33763 | YIPPEE DOMAIN-CONTAINING PROTEIN |
Ama33765 | IONOTROPIC RECEPTOR 20A-RELATED |
Ama33766 | PROTEIN CBG20215-RELATED |
Ama33767 | |
Ama33768 | PUTATIVE-RELATED |
Ama33770 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama33771 | - |
Ama33772 | |
Ama33773 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama33774 | PARANEOPLASTIC ANTIGEN |
Ama33775 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama33776 | MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT |
Ama33777 | DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED |
Ama33779 | UNCHARACTERIZED |
Ama33780 | ARSENITE-RESISTANCE PROTEIN 2 |
Ama33781 | PARTNER OF SLD5 |
Ama33782 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama33784 | BONUS, ISOFORM C-RELATED |
Ama33785 | WNT RELATED |
Ama33786 | |
Ama33787 | |
Ama33788 | WNT RELATED |
Ama33789 |