The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33357 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33358 | PUTATIVE-RELATED |
Ama33360 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Ama33361 | TRANSMEMBRANE PROTEIN 121B |
Ama33362 | PELOTA |
Ama33363 | |
Ama33364 | LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1 |
Ama33365 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama33366 | |
Ama33368 | |
Ama33369 | LIN-24 (TWENTY-FOUR) LIKE |
Ama33370 | PUTATIVE-RELATED |
Ama33371 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama33372 | |
Ama33373 | LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1 |
Ama33375 | |
Ama33376 | |
Ama33378 | |
Ama33380 | ATP-DEPENDENT DNA HELICASE |
Ama33381 | THAP DOMAIN PROTEIN |
Ama33382 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama33384 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
Ama33385 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama33386 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Ama33388 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama33389 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama33391 | ARGINASE/AGMATINASE |
Ama33392 | |
Ama33393 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama33394 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama33395 | - |
Ama33397 | |
Ama333_5db7b01a | THAP DOMAIN PROTEIN |
Ama33404 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama33405 | SLEI FAMILY PROTEIN |
Ama33406 | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED |
Ama33407 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Ama33412 | |
Ama33415 | |
Ama33416 | |
Ama33417 | |
Ama33418 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
Ama33419 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
Ama33420 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Ama33421 | ZINC FINGER PROTEIN |
Ama33422 | ZINC FINGER PROTEIN |
Ama33423 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama33424 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
Ama33425 | ZINC FINGER PROTEIN 142 |
Ama33426 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |