The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33175 | CALCIUM-BINDING PROTEIN 39-RELATED |
Ama33176 | - |
Ama33177 | FLAVIN MONOAMINE OXIDASE |
Ama33178 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama33179 | |
Ama33181 | |
Ama33182 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama33183 | |
Ama33185 | |
Ama33186 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama33187 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama33188 | FATTY ACID DESATURASE 2 |
Ama33189 | FATTY ACID DESATURASE 2 |
Ama33190 | COILED-COIL DOMAIN-CONTAINING PROTEIN 39 |
Ama33191 | TRANSMEMBRANE PROTEIN |
Ama33192 | |
Ama33193 | HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130 |
Ama33195 | PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED |
Ama33196 | RHOMBOID PROTEASE |
Ama33197 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3 |
Ama33198 | ATP-DEPENDENT RNA HELICASE DBP3 |
Ama33199 | ATP-DEPENDENT RNA HELICASE DBP3 |
Ama331_5db7b01a | BTB/POZ DOMAIN-CONTAINING PROTEIN 16 |
Ama33200 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama33201 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama33202 | RAS-RELATED PROTEIN RAB |
Ama33203 | |
Ama33204 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
Ama33205 | CENTROSOMAL PROTEIN OF 19K CEP19 |
Ama33206 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 |
Ama33207 | |
Ama33208 | ARGININE AND GLUTAMATE-RICH PROTEIN 1 |
Ama33209 | |
Ama33210 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
Ama33211 | |
Ama33212 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
Ama33215 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama33216 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama33217 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
Ama33218 | RIBONUCLEASE H2 SUBUNIT B |
Ama33219 | GLUTATHIONE SYNTHETASE |
Ama33220 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama33221 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33222 | DRONGO, ISOFORM F |
Ama33223 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |
Ama33224 | ZGC:172121 |
Ama33225 | MYOSIN VII, XV |
Ama33227 | C13ORF1 PROTEIN-RELATED |
Ama33228 | CAMK FAMILY PROTEIN KINASE |
Ama33229 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |