The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33293 | ADP-RIBOSYL CYCLASE |
Ama33295 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
Ama33296 | |
Ama33297 | |
Ama33298 | |
Ama33299 | D-ERYTHRULOSE REDUCTASE |
Ama33300 | G-PROTEIN COUPLED RECEPTOR |
Ama33301 | |
Ama33302 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama33303 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama33304 | |
Ama33307 | MSL2-RELATED |
Ama33308 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama33309 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama33310 | THAP DOMAIN PROTEIN |
Ama33312 | BONUS, ISOFORM C-RELATED |
Ama33313 | BONUS, ISOFORM C-RELATED |
Ama33314 | CYCLINS |
Ama33315 | AGAP010540-PA |
Ama33316 | AAA DOMAIN-CONTAINING |
Ama33317 | |
Ama33318 | LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN |
Ama33319 | CENTROBIN |
Ama33320 | CENTROBIN |
Ama33321 | LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN |
Ama33323 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama33324 | HILLARIN |
Ama33326 | TOLL-LIKE RECEPTOR |
Ama33327 | |
Ama33328 | |
Ama33329 | |
Ama33330 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama33331 | |
Ama33332 | CYTOCHROME P450 508A4-RELATED |
Ama33333 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama33334 | |
Ama33335 | THAP DOMAIN PROTEIN |
Ama33336 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama33338 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
Ama33340 | ECTO-NOX DISULFIDE-THIOL EXCHANGER |
Ama33341 | MANNOSE-6-PHOSPHATE ISOMERASE |
Ama33342 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama33343 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama33344 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama33345 | |
Ama33351 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Ama33352 | BONUS, ISOFORM C-RELATED |
Ama33353 | BONUS, ISOFORM C-RELATED |
Ama33355 | MYELIN PROTEOLIPID |
Ama33356 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |