The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama33112 | LEUCOKININ RECEPTOR-RELATED |
Ama33114 | AMINO ACID TRANSPORTER |
Ama33115 | AMINO ACID TRANSPORTER |
Ama33116 | |
Ama33117 | AMINO ACID TRANSPORTER |
Ama33118 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33119 | SUCCINYL-COA SYNTHETASE BETA CHAIN |
Ama33120 | ANOSMIN |
Ama33122 | INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG |
Ama33123 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Ama33125 | THAP DOMAIN PROTEIN |
Ama33126 | THAP DOMAIN PROTEIN |
Ama33127 | |
Ama33128 | METALLOPROTEASE INHIBITOR |
Ama33129 | |
Ama33130 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama33131 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama33132 | INHIBITOR OF APOPTOSIS |
Ama33133 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED |
Ama33134 | |
Ama33135 | |
Ama33136 | RABPHILIN, ISOFORM A |
Ama33137 | |
Ama33139 | MONOCARBOXYLATE TRANSPORTER |
Ama33140 | |
Ama33141 | MONOCARBOXYLATE TRANSPORTER |
Ama33142 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Ama33143 | TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED |
Ama33144 | AMINO ACID TRANSPORTER |
Ama33145 | AMINO ACID TRANSPORTER |
Ama33146 | |
Ama33148 | NXPE FAMILY MEMBER |
Ama33150 | |
Ama33152 | DIACYLGLYCEROL KINASE |
Ama33153 | SI:CH73-193C12.2-RELATED |
Ama33154 | SI:CH73-193C12.2-RELATED |
Ama33155 | DIACYLGLYCEROL KINASE |
Ama33156 | |
Ama33157 | |
Ama33158 | SH2 DOMAIN-CONTAINING PROTEIN |
Ama33162 | PUTATIVE-RELATED |
Ama33163 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama33164 | AUTOPHAGY PROTEIN 16-LIKE |
Ama33165 | AMINE OXIDASE |
Ama33167 | |
Ama33169 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
Ama33170 | |
Ama33171 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama33172 | |
Ama33174 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |