The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32690 | |
Ama32691 | |
Ama32692 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
Ama32693 | AAA-FAMILY ATPASE |
Ama32694 | |
Ama32695 | AAA-FAMILY ATPASE |
Ama32696 | |
Ama32697 | AGAP000321-PA |
Ama32699 | |
Ama326_5db7b01a | CARBOHYDRATE SULFOTRANSFERASE |
Ama32700 | |
Ama32701 | POLYCOMB GROUP PROTEIN PC |
Ama32702 | RP42 RELATED |
Ama32703 | CELL DIVISION PROTEIN KINASE |
Ama32704 | KELCH PROTEIN |
Ama32705 | KELCH PROTEIN |
Ama32706 | COP1-INTERACTIVE PROTEIN 1 |
Ama32707 | |
Ama32708 | ACROSIN-RELATED |
Ama32709 | |
Ama32710 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama32711 | METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE |
Ama32712 | DIENCEPHALON/MESENCEPHALON HOMEOBOX PROTEIN 1 |
Ama32713 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32715 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
Ama32717 | |
Ama32718 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama32719 | |
Ama32720 | |
Ama32721 | WNT RELATED |
Ama32723 | UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN |
Ama32724 | UNCHARACTERIZED |
Ama32728 | NEUROLIGIN |
Ama32729 | NEUROLIGIN |
Ama32731 | PROTEIN CBG26694 |
Ama32732 | |
Ama32733 | |
Ama32734 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32735 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32736 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama32737 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama32738 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama32739 | SIMILAR TO RIKEN CDNA E130308A19 |
Ama32740 | |
Ama32741 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama32742 | NEUROLIGIN |
Ama32743 | |
Ama32744 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32745 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama32746 | NXPE FAMILY MEMBER |