The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32557 | DUF853 DOMAIN-CONTAINING PROTEIN |
Ama32558 | |
Ama32560 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
Ama32561 | |
Ama32564 | P140CAP/SNIP-RELATED |
Ama32566 | PUTATIVE-RELATED |
Ama32567 | PUTATIVE-RELATED |
Ama32568 | |
Ama32569 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
Ama32570 | CALCIUM BINDING PROTEIN |
Ama32571 | ZGC:153157 |
Ama32576 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32577 | CYTOCHROME P450 FAMILY 3 |
Ama32578 | C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180 |
Ama32579 | |
Ama32580 | NUCLEOPORIN AMO1-LIKE |
Ama32582 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama32583 | |
Ama32588 | BLOC-1 COMPLEX SUBUNIT 1 |
Ama32589 | - |
Ama32590 | |
Ama32591 | OS08G0560600 PROTEIN |
Ama32594 | FIDIPIDINE |
Ama32595 | INSULIN-INDUCED GENE 1 |
Ama32596 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
Ama32597 | |
Ama325_5db7b01a | UNCHARACTERIZED |
Ama32602 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
Ama32604 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32605 | METALLOPROTEASE TLDD |
Ama32606 | LANC-LIKE PROTEIN |
Ama32607 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
Ama32608 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama32609 | TRANSPOSON |
Ama32610 | UNCHARACTERIZED |
Ama32611 | - |
Ama32612 | |
Ama32613 | LITTLE ELONGATION COMPLEX SUBUNIT 2 |
Ama32614 | |
Ama32615 | FORKHEAD BOX PROTEIN BINIOU |
Ama32619 | |
Ama32620 | |
Ama32621 | |
Ama32622 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama32623 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama32624 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama32625 | TRANSPOSABLE ELEMENT-RELATED |
Ama32626 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama32627 | THAP DOMAIN PROTEIN |
Ama32628 | OTU DOMAIN CONTAINING PROTEIN |