The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama32103 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama32104 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama32105 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama32106 | SPHINGOSINE KINASE |
Ama32107 | |
Ama32108 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama32109 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama32110 | |
Ama32111 | |
Ama32112 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama32113 | PYM PROTEIN |
Ama32114 | MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 |
Ama32115 | |
Ama32116 | TELOMERASE REVERSE TRANSCRIPTASE |
Ama32117 | MACROGLOBULIN / COMPLEMENT |
Ama32118 | MACROGLOBULIN / COMPLEMENT |
Ama32119 | WD REPEAT-CONTAINING PROTEIN 75 |
Ama32120 | |
Ama32121 | ZINC FINGER PROTEIN |
Ama32122 | RETICULOCALBIN |
Ama32123 | D123 PROTEIN |
Ama32124 | REVERSE TRANSCRIPTASES |
Ama32125 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
Ama32127 | REPLICATION PROTEIN A3 |
Ama32128 | DFG10 PROTEIN |
Ama32129 | OXIDOREDUCTASE-RELATED |
Ama32130 | PRE-MRNA-PROCESSING PROTEIN PRP40 |
Ama32132 | |
Ama32133 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
Ama32134 | ZINC FINGER PROTEIN |
Ama32137 | DEOXYRIBONUCLEASE |
Ama32139 | |
Ama32140 | ENOYL-COA HYDRATASE |
Ama32142 | PHOSPHATIDYLINOSITOL KINASE |
Ama32143 | |
Ama32144 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Ama32145 | INHIBITOR OF GROWTH PROTEIN |
Ama32146 | E3 UBIQUITIN-PROTEIN LIGASE MYCBP2 |
Ama32148 | - |
Ama32149 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama32152 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama32153 | |
Ama32154 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama32155 | ABC TRANSPORTER G FAMILY MEMBER 28 |
Ama32157 | |
Ama32158 | |
Ama32159 | THAP DOMAIN PROTEIN |
Ama32160 | |
Ama32161 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama32162 |