The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31963 | |
Ama31964 | |
Ama31965 | |
Ama31966 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama31967 | FATTY ACID AMIDE HYDROLASE |
Ama31968 | |
Ama31969 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
Ama31970 | CYTOCHROME P450 FAMILY 3 |
Ama31971 | |
Ama31972 | |
Ama31973 | |
Ama31975 | |
Ama31976 | |
Ama31978 | LD33804P |
Ama31979 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama31980 | |
Ama31981 | |
Ama31983 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31984 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31985 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama31989 | METALLOPEPTIDASE M28 FAMILY MEMBER |
Ama31990 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama31991 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Ama31993 | |
Ama31995 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Ama31996 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Ama31997 | GLUTAMATE 5-KINASE |
Ama31998 | COMM DOMAIN-CONTAINING PROTEIN 3 |
Ama31999 | TUBULIN |
Ama31_5db7b01a | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
Ama31_5db84494 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama32000 | SRCR DOMAIN-CONTAINING PROTEIN |
Ama32001 | |
Ama32002 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama32003 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama32004 | |
Ama32005 | |
Ama32006 | |
Ama32007 | FTP DOMAIN-CONTAINING PROTEIN |
Ama32010 | |
Ama32011 | ESOPHAGEAL CANCER ASSOCIATED PROTEIN |
Ama32012 | ESOPHAGEAL CANCER ASSOCIATED PROTEIN |
Ama32013 | DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5 |
Ama32014 | CENTROMERE PROTEIN E |
Ama32015 | ATP-DEPENDENT RNA HELICASE |
Ama32016 | ATP-DEPENDENT RNA HELICASE |
Ama32017 | |
Ama32018 | |
Ama32019 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 69 |
Ama32020 | 14-3-3 PROTEIN |