The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama31582 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31583 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31584 | METHYLTRANSFERASE-RELATED |
Ama31585 | ELL-ASSOCIATED FACTOR EAF |
Ama31586 | |
Ama31587 | MUSCLEBLIND-LIKE PROTEIN |
Ama31589 | HISTIDINE-RICH GLYCOPROTEIN |
Ama31590 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama31591 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
Ama31592 | |
Ama31593 | |
Ama31594 | FERREDOXIN-RELATED |
Ama31595 | WINS1, 2 PROTEIN |
Ama31596 | ZINC FINGER PROTEIN |
Ama31597 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
Ama31598 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama31599 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
Ama315_5db7b01a | TROPONIN |
Ama31600 | |
Ama31601 | GLUTATHIONE S-TRANSFERASE |
Ama31602 | HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN |
Ama31603 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Ama31604 | BONUS, ISOFORM C-RELATED |
Ama31605 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama31606 | RYANODINE RECEPTOR AND IP3 RECEPTOR |
Ama31608 | |
Ama31609 | - |
Ama31610 | PERIAXIN/AHNAK |
Ama31611 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama31613 | 14-3-3 PROTEIN |
Ama31614 | |
Ama31615 | |
Ama31616 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31617 | |
Ama31619 | |
Ama31621 | |
Ama31624 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama31627 | |
Ama31628 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31629 | MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE |
Ama31630 | |
Ama31632 | 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE |
Ama31633 | |
Ama31634 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama31635 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
Ama31637 | 60S RIBOSOMAL PROTEIN L27 |
Ama31639 | TATA BOX-BINDING PROTEIN ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C |
Ama31641 | RING BOX |
Ama31642 | ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE |
Ama31643 |